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Affymetrix and Illumina microarray data analysis using R/Bioconductor

Tue - Apr 25, 2017 10:00am (2.5 hours)

 The course is a general introduction to Microarrays and the use of R/Bioconductor to carry out microarray data analysis. Following introduction the workshop starts with hands‐on exercise on how to install R and Bioconductor GUI packages. The course is mainly based on the use of Bioconductor open source packages for analyzing single channel and two channel data sets. Only basic R coding will be introduced since most the analysis are performed using OneChannelGUI, a graphical interface to Bioconductor tools, designed for life scientists who are not familiar with R language. Students will learn how to carry out the following; Quality control, Normalization, Filtering, Statistical analysis, and Differential expression.

Location Countway Library at Harvard Medical School Lower Level 2, Room 025 Countway Library, Lower Level 2, 025

InstructorGali Reddy, Harvard Catalyst / Countway
Type of ClassBioinformatics - Microarrays and Gene Expression
Hands-on?Yes
Prerequisites
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